If all they did is a diagnostic check (OBDII) they lied about diagnosis and were guessing. A cat will never show up in the computer and the only way to check it is to check exhaust pressure through the O2 sensor bung before the cat.
Anyway, $200 max for a stock cat and installation. $700 is pure ripoff. Don't go back to that shop for future diagnosis or anything, they're just after money.
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'13 Mustang 3.7V6 - MT82
'00 GP SE (L67 Swap, XP, Headers, 3.25")
'98 GTP, '01 Bonne